8p23.1 Copy Number Variation
Description
Deletion and duplications in this region involve 23 protein coding genes. Patients with a deletion often suffer from diaphragmatic hernia (CDH) and cardiac defects.
Genomic location
Coordinates:
Disorder Information from Orphanet
8p23.1 duplication syndrome is a rare chromosomal anomaly syndrome, resulting from the partial duplication of the short arm of chromosome 8, with a highly variable phenotype, principally characterized by mild to moderate developmental delay, intellectual disability, mild facial dysmorphism (incl. prominent forehead, arched eyebrows, broad nasal bridge, upturned nares, cleft lip and/or palate) and congenital cardiac anomalies (e.g., atrioventricular septal defect). Other reported features include macrocephaly, behavioral abnormalities (e.g., attention deficit disorder), seizures, hypotonia and ocular and digital anomalies (poly/syndactyly).
| Obligate (100%) |
Very frequent (99–80%) |
Frequent (79–30%) |
Occasional (29–5%) |
Very rare (<4-1%) |
Excluded (0%) |
|---|---|---|---|---|---|
| - | - | - | - |
8p23.1 deletion involves a partial deletion of the short arm of chromosome 8 characterized by low birth weight, postnatal growth deficiency, mild intellectual deficit, hyperactivity, craniofacial abnormalities, and congenital heart defects.
Molecular pathway
Gene Information
| HGNC | Gene Name | NCBI | Ensembl | UniProt |
|---|---|---|---|---|
| CLDN23 | claudin 23 | 137075 | ENSG00000253958 | Q96B33 |
| MFHAS1 | multifunctional ROCO family signaling regulator 1 | 9258 | ENSG00000147324 | Q9Y4C4 |
| ERI1 | exoribonuclease 1 | 90459 | ENSG00000104626 | Q8IV48 |
| PPP1R3B | protein phosphatase 1 regulatory subunit 3B | 79660 | ENSG00000173281 | Q86XI6 |
| TNKS | tankyrase | 8658 | ENSG00000173273 | O95271 |
| MSRA | methionine sulfoxide reductase A | 4482 | ENSG00000175806 | Q9UJ68 |
| PRSS55 | serine protease 55 | 203074 | ENSG00000184647 | Q6UWB4 |
| RP1L1 | RP1 like 1 | 94137 | ENSG00000183638 | Q8IWN7 |
| C8orf74 | chromosome 8 open reading frame 74 | 203076 | ENSG00000171060 | Q6P047 |
| SOX7 | SRY-box transcription factor 7 | 83595 | ENSG00000171056 | Q9BT81 |
| PINX1 | PIN2 (TERF1) interacting telomerase inhibitor 1 | 54984 | ENSG00000254093 | Q96BK5 |
| XKR6 | XK related 6 | 286046 | ENSG00000171044 | Q5GH73 |
| MTMR9 | myotubularin related protein 9 | 66036 | ENSG00000104643 | Q96QG7 |
| SLC35G5 | solute carrier family 35 member G5 | 83650 | ENSG00000177710 | Q96KT7 |
| FAM167A | family with sequence similarity 167 member A | 83648 | ENSG00000154319 | Q96KS9 |
| BLK | BLK proto-oncogene, Src family tyrosine kinase | 640 | ENSG00000136573 | P51451 |
| GATA4 | GATA binding protein 4 | 2626 | ENSG00000136574 | P43694 |
| NEIL2 | nei like DNA glycosylase 2 | 252969 | ENSG00000154328 | Q969S2 |
| FDFT1 | farnesyl-diphosphate farnesyltransferase 1 | 2222 | ENSG00000079459 | P37268 |
| CTSB | cathepsin B | 1508 | ENSG00000164733 | P07858 |
| DEFB136 | defensin beta 136 | 613210 | ENSG00000205884 | Q30KP8 |
| DEFB135 | defensin beta 135 | 613209 | ENSG00000205883 | Q30KP9 |
| DEFB134 | defensin beta 134 | 613211 | ENSG00000205882 | Q4QY38 |
Evidence
- Loading citation... [PMID: 37123967]
- Loading citation... [PMID: 20969981]
- Loading citation... [PMID: 19606479]
- Loading citation... [PMID: 26097203]